Changes in version 1.3.0                        

[2022/02/09]

  - shuffle_segments() reinstated with new code from Fabian.
      - switched to data.table::fread to improve import performance in
        readMEA
      - parallel computation
          - MEAccf() now uses parallel computation by default
          - readMEA() can use parallel computation, albeit with short
            files it does not provide any meaningful advantage (it may
            even significantly downgrade performance).

                 Changes in version 1.2.2 (2022-02-17)                  

[2022/08/30]

  - MEAlagPlot mea.line and contrast.line parameters changed to alpha
    values to have better control.

[2022/02/09]

  - shuffle_segments() was unreliable. It was disabled until someone
    fixes it.

                        Changes in version 1.2.1                        

[2021/03/31] minor bugfixes

  - lagSec=0 and lagSec=1 are now supported
      - documentation update

                 Changes in version 1.2.0 (2020-08-04)                  

[2020/07/29] Yearly update to CRAN

  - the package is now compatible with R version 4.0
      - New function: shuffle_segment(), offering within subject
        shuffling. This function is included for replication of older
        studies. shuffle() is still more conservative, and suggested
        approach to pseudosynchrony.
      - New function CCFartefacts() to identify sequences with extremely
        high correlation, which may require inspection of the videos.
      - New function: MEAreplace() allows to automatically delete (set
        to NA) or replace windows of MEA data, based on a data frame
        created by hand, or with functions like CCFartefacts().

Minor changes

  - various improvements in the documentation
  - all function now dynamically use ccfResNames.
  - writeMEA now reports all ccfResNames.
  - ccfRes now stores as well the 'bestLag' values, and the start and
    end of the synchronization windows (thanks to anonymous reviewer 2
    for the suggestion).
  - MEAheatmap received a new parameter 'mirror' that offers finer
    control on the color scale.
  - shuffle() now allows to specify size = "max", to use all possible
    combinations.
  - automatic detection of 'na.rm' arguments in MEAscale FUNs was buggy.
    So now there is a new argument 'removeNA' which applies na.omit on
    the data before submitting it to the scaling FUN.
  - improved the MEAmap use of dots (...), which are now recycled and
    iterating correctly (when not a function)

                     Changes in version 1.1.0.9002                      

  - fixed a bug preventing heatmaps to be plotted with missing data
      - improved MEAdistplot() to allow grouping by "id", "session", and
        "group"

                     Changes in version 1.1.0.9001                      

  - improved MEAdistplot() to support single session groups
      - fixed a bug in MEAdistplot for plotting single groups

                 Changes in version 1.1.0 (2019-03-22)                  

[2019/03/22] Yearly update to CRAN

  - included LICENSE file
      - improved fisher's transform performance
      - updated rangeRescale function
      - fixed minor bug in heatmap scaling
      - added heatmap "rescale" parameter to highlight small trends in
        data
      - improved axis label in various plots
      - plot.MEA can now use "duration" instead of "to"
      - various minor bug fixes
      - added plot.MEAlist

                     Changes in version 1.0.0.9012                      

  - Implemented "[.MEAlist" method to extract from MEAlist while
    retaining metadata.
  - included a function to extract CCF values (getCCF())
  - shuffle now retains the names of the original signals in its uid

                     Changes in version 1.0.0.9011                      

  - fixed a bug in plot.MEA when interpolation results in NA vals
  - updated documentation in readMEA
  - all functions accepting MEAlist objects now should accept a list
    instead and try to parse as MEAlist internally
  - new getter functions for MEA and MEAlist attributes

                     Changes in version 1.0.0.9010                      

  - more informative error messages
  - fixed smaller bugs

                 Changes in version 1.0.0 (2018-03-16)                  

  - Everything should work